Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13□□□□□ -0.33
TCRAP04437 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
TCRAP04437 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13□□□□□ -0.33
TCRAP04437 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13□□□□□ -0.33
TCRAP04437 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13□□□□□ -0.33
TCRAP04437 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13□□□□□ -0.33
TCRAP04437 AL049757.1-201ENST00000616842 1596 ntBASIC13□□□□□ -0.33
TCRAP04437 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TCRAP04437 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TCRAP04437 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 MIR662-201ENST00000384847 95 ntBASIC13□□□□□ -0.33
TCRAP04437 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 CD70-202ENST00000423145 881 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 SPDYE15P-201ENST00000424157 909 ntBASIC13□□□□□ -0.33
TCRAP04437 AC103564.2-201ENST00000432853 1299 ntBASIC13□□□□□ -0.33
TCRAP04437 AC122714.2-201ENST00000502787 707 ntBASIC13□□□□□ -0.33
TCRAP04437 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13□□□□□ -0.33
TCRAP04437 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13□□□□□ -0.33
TCRAP04437 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13□□□□□ -0.33
TCRAP04437 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 STK25P1-201ENST00000585406 838 ntBASIC13□□□□□ -0.33
TCRAP04437 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TCRAP04437 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13□□□□□ -0.33
TCRAP04437 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TCRAP04437 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 HYMAI-201ENST00000635591 3347 ntBASIC13□□□□□ -0.33
TCRAP04437 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13□□□□□ -0.33
TCRAP04437 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRAP04437 ALOX12P2-203ENST00000570921 1945 ntBASIC13□□□□□ -0.33
TCRAP04437 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TCRAP04437 PAUPAR-201ENST00000630360 2965 ntBASIC12.99□□□□□ -0.33
TCRAP04437 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 AL135999.2-201ENST00000622438 1686 ntBASIC12.99□□□□□ -0.33
TCRAP04437 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRAP04437 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.99□□□□□ -0.33
TCRAP04437 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRAP04437 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TCRAP04437 LINC01568-207ENST00000641790 1380 ntBASIC12.99□□□□□ -0.33
TCRAP04437 KRT18P22-201ENST00000402024 1347 ntBASIC12.99□□□□□ -0.33
TCRAP04437 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRAP04437 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TCRAP04437 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.99□□□□□ -0.33
TCRAP04437 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRAP04437 STARP1-201ENST00000397973 869 ntBASIC12.99□□□□□ -0.33
TCRAP04437 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TCRAP04437 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRAP04437 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRAP04437 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.99□□□□□ -0.33
TCRAP04437 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 AL365203.3-201ENST00000609742 2057 ntBASIC12.99□□□□□ -0.33
TCRAP04437 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TCRAP04437 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
TCRAP04437 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TCRAP04437 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRAP04437 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TCRAP04437 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms