Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC105917.1-201ENST00000506637 2539 ntBASIC16.12■□□□□ 0.17
MT-ND1P03886 HLA-A-202ENST00000376806 1854 ntBASIC16.12■□□□□ 0.17
MT-ND1P03886 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 HBZP1-201ENST00000354915 429 ntBASIC16.12■□□□□ 0.17
MT-ND1P03886 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.12■□□□□ 0.17
MT-ND1P03886 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 AC124947.2-201ENST00000547118 1133 ntBASIC16.12■□□□□ 0.17
MT-ND1P03886 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.12■□□□□ 0.17
MT-ND1P03886 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.12■□□□□ 0.17
MT-ND1P03886 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.12■□□□□ 0.17
MT-ND1P03886 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-ND1P03886 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-ND1P03886 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MT-ND1P03886 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 DBET-201ENST00000630918 3363 ntBASIC16.12■□□□□ 0.17
MT-ND1P03886 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 AP002414.2-201ENST00000591780 3365 ntBASIC16.11■□□□□ 0.17
MT-ND1P03886 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 AC096633.1-201ENST00000422446 749 ntBASIC16.11■□□□□ 0.17
MT-ND1P03886 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.11■□□□□ 0.17
MT-ND1P03886 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.11■□□□□ 0.17
MT-ND1P03886 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
MT-ND1P03886 GPR32P1-201ENST00000601788 811 ntBASIC16.11■□□□□ 0.17
MT-ND1P03886 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.11■□□□□ 0.17
MT-ND1P03886 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
MT-ND1P03886 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MT-ND1P03886 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND1P03886 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND1P03886 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 EGFEM1P-202ENST00000431685 1563 ntBASIC16.1■□□□□ 0.17
MT-ND1P03886 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MT-ND1P03886 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND1P03886 KRT18P38-201ENST00000449496 1282 ntBASIC16.1■□□□□ 0.17
MT-ND1P03886 AL359075.1-203ENST00000462729 1002 ntBASIC16.1■□□□□ 0.17
MT-ND1P03886 AC068472.1-201ENST00000474589 881 ntBASIC16.1■□□□□ 0.17
MT-ND1P03886 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms