Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
IFNA1P01562 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
IFNA1P01562 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.52□□□□□ -0.24
IFNA1P01562 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IFNA1P01562 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IFNA1P01562 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
IFNA1P01562 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IFNA1P01562 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
IFNA1P01562 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IFNA1P01562 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
IFNA1P01562 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IFNA1P01562 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
IFNA1P01562 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.52□□□□□ -0.24
IFNA1P01562 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
IFNA1P01562 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.52□□□□□ -0.24
IFNA1P01562 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IFNA1P01562 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
IFNA1P01562 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.52□□□□□ -0.25
IFNA1P01562 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.52□□□□□ -0.25
IFNA1P01562 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 AC080038.1-201ENST00000611274 1154 ntBASIC13.52□□□□□ -0.25
IFNA1P01562 MIR6786-201ENST00000616843 113 ntBASIC13.52□□□□□ -0.25
IFNA1P01562 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.52□□□□□ -0.25
IFNA1P01562 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
IFNA1P01562 KRT8P47-201ENST00000604727 1398 ntBASIC13.52□□□□□ -0.25
IFNA1P01562 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 AC087386.2-201ENST00000623212 4637 ntBASIC13.52□□□□□ -0.25
IFNA1P01562 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.52□□□□□ -0.25
IFNA1P01562 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
IFNA1P01562 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.52□□□□□ -0.25
IFNA1P01562 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IFNA1P01562 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
IFNA1P01562 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
IFNA1P01562 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.51□□□□□ -0.25
IFNA1P01562 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
IFNA1P01562 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
IFNA1P01562 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.51□□□□□ -0.25
IFNA1P01562 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.51□□□□□ -0.25
IFNA1P01562 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.51□□□□□ -0.25
IFNA1P01562 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.51□□□□□ -0.25
IFNA1P01562 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
IFNA1P01562 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 AL353807.1-201ENST00000427475 662 ntBASIC13.51□□□□□ -0.25
IFNA1P01562 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 AC083906.2-201ENST00000511578 360 ntBASIC13.51□□□□□ -0.25
IFNA1P01562 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.51□□□□□ -0.25
IFNA1P01562 AP000692.2-201ENST00000608391 879 ntBASIC13.51□□□□□ -0.25
IFNA1P01562 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.51□□□□□ -0.25
IFNA1P01562 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
IFNA1P01562 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IFNA1P01562 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms