Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 AC006504.4-201ENST00000592118 1568 ntBASIC13.62□□□□□ -0.23
NDUFA3O95167 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 AC099398.1-201ENST00000567919 2776 ntBASIC13.62□□□□□ -0.23
NDUFA3O95167 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NDUFA3O95167 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 TPM4P1-201ENST00000436100 807 ntBASIC13.62□□□□□ -0.23
NDUFA3O95167 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFA3O95167 AC136632.2-201ENST00000512891 861 ntBASIC13.62□□□□□ -0.23
NDUFA3O95167 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFA3O95167 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
NDUFA3O95167 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFA3O95167 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.62□□□□□ -0.23
NDUFA3O95167 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NDUFA3O95167 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 AC092068.3-201ENST00000587894 2016 ntBASIC13.62□□□□□ -0.23
NDUFA3O95167 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA3O95167 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFA3O95167 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.62□□□□□ -0.23
NDUFA3O95167 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NDUFA3O95167 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA3O95167 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA3O95167 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA3O95167 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NDUFA3O95167 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA3O95167 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA3O95167 AD000864.1-201ENST00000624076 2295 ntBASIC13.61□□□□□ -0.23
NDUFA3O95167 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA3O95167 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
NDUFA3O95167 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA3O95167 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA3O95167 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.61□□□□□ -0.23
NDUFA3O95167 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NDUFA3O95167 PTCHD3P3-201ENST00000403073 906 ntBASIC13.61□□□□□ -0.23
NDUFA3O95167 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 HNRNPDP1-201ENST00000439535 754 ntBASIC13.61□□□□□ -0.23
NDUFA3O95167 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.61□□□□□ -0.23
NDUFA3O95167 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA3O95167 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
NDUFA3O95167 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA3O95167 AL773604.1-201ENST00000617417 272 ntBASIC13.61□□□□□ -0.23
NDUFA3O95167 PGM5P2-202ENST00000637225 1043 ntBASIC13.61□□□□□ -0.23
NDUFA3O95167 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA3O95167 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 AC022211.2-201ENST00000585075 2527 ntBASIC13.61□□□□□ -0.23
NDUFA3O95167 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA3O95167 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA3O95167 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA3O95167 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA3O95167 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.6□□□□□ -0.23
NDUFA3O95167 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA3O95167 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NDUFA3O95167 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 AL021920.2-201ENST00000624828 1351 ntBASIC13.6□□□□□ -0.23
NDUFA3O95167 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NDUFA3O95167 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA3O95167 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms