Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.86□□□□□ -0.03
UPK1BO75841 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1BO75841 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1BO75841 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
UPK1BO75841 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
UPK1BO75841 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
UPK1BO75841 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK1BO75841 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK1BO75841 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK1BO75841 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK1BO75841 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK1BO75841 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.85□□□□□ -0.03
UPK1BO75841 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.85□□□□□ -0.03
UPK1BO75841 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UPK1BO75841 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UPK1BO75841 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1BO75841 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK1BO75841 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1BO75841 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
UPK1BO75841 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1BO75841 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 FRMD8P1-201ENST00000440433 1524 ntBASIC14.84□□□□□ -0.03
UPK1BO75841 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1BO75841 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
UPK1BO75841 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 HLA-J-202ENST00000469281 1241 ntBASIC14.84□□□□□ -0.03
UPK1BO75841 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
UPK1BO75841 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK1BO75841 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1BO75841 AF201337.1-201ENST00000520239 748 ntBASIC14.84□□□□□ -0.03
UPK1BO75841 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 AC104390.1-201ENST00000555663 520 ntBASIC14.84□□□□□ -0.03
UPK1BO75841 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.84□□□□□ -0.03
UPK1BO75841 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1BO75841 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1BO75841 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 AC139749.1-202ENST00000617529 3139 ntBASIC14.84□□□□□ -0.03
UPK1BO75841 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
UPK1BO75841 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
UPK1BO75841 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1BO75841 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms