Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC4O75487 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC4O75487 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC4O75487 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GPC4O75487 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC4O75487 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC4O75487 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
GPC4O75487 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC4O75487 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GPC4O75487 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
GPC4O75487 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
GPC4O75487 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
GPC4O75487 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GPC4O75487 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
GPC4O75487 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
GPC4O75487 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
GPC4O75487 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 SPDYE21P-201ENST00000413323 827 ntBASIC17.11■□□□□ 0.33
GPC4O75487 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 RBM17P3-201ENST00000417687 1192 ntBASIC17.11■□□□□ 0.33
GPC4O75487 UNC93B7-201ENST00000509439 705 ntBASIC17.11■□□□□ 0.33
GPC4O75487 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC4O75487 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.11■□□□□ 0.33
GPC4O75487 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.11■□□□□ 0.33
GPC4O75487 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC4O75487 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC4O75487 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
GPC4O75487 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GPC4O75487 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC4O75487 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC4O75487 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC4O75487 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 AC079776.2-201ENST00000641154 1609 ntBASIC17.1■□□□□ 0.33
GPC4O75487 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GPC4O75487 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC4O75487 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GPC4O75487 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GPC4O75487 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 AKR1C7P-201ENST00000305623 895 ntBASIC17.1■□□□□ 0.33
GPC4O75487 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC4O75487 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.1■□□□□ 0.33
GPC4O75487 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
GPC4O75487 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.1■□□□□ 0.33
GPC4O75487 IFNL4P1-201ENST00000607083 540 ntBASIC17.1■□□□□ 0.33
GPC4O75487 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GPC4O75487 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GPC4O75487 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GPC4O75487 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC4O75487 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC4O75487 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GPC4O75487 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GPC4O75487 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC4O75487 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GPC4O75487 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC4O75487 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms