Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 FLJ13224-201ENST00000313737 1514 ntBASIC16.9■□□□□ 0.3
PCDHGA12O60330 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA12O60330 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA12O60330 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
PCDHGA12O60330 AC100803.2-201ENST00000562459 1963 ntBASIC16.89■□□□□ 0.3
PCDHGA12O60330 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.89■□□□□ 0.3
PCDHGA12O60330 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
PCDHGA12O60330 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 AL590787.1-201ENST00000568856 1315 ntBASIC16.89■□□□□ 0.29
PCDHGA12O60330 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA12O60330 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA12O60330 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 AC084018.2-201ENST00000613093 2607 ntBASIC16.88■□□□□ 0.29
PCDHGA12O60330 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 AC124067.4-201ENST00000519691 2379 ntBASIC16.88■□□□□ 0.29
PCDHGA12O60330 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA12O60330 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA12O60330 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA12O60330 AL035633.1-201ENST00000406139 838 ntBASIC16.87■□□□□ 0.29
PCDHGA12O60330 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 BCRP1-201ENST00000444246 691 ntBASIC16.87■□□□□ 0.29
PCDHGA12O60330 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 AC023141.5-201ENST00000458585 616 ntBASIC16.87■□□□□ 0.29
PCDHGA12O60330 AC112191.1-201ENST00000523689 701 ntBASIC16.87■□□□□ 0.29
PCDHGA12O60330 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA12O60330 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms