Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PCDH7O60245 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDH7O60245 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDH7O60245 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDH7O60245 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 TSPY19P-201ENST00000418461 509 ntBASIC16.28■□□□□ 0.2
PCDH7O60245 TSPY18P-201ENST00000441642 509 ntBASIC16.28■□□□□ 0.2
PCDH7O60245 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH7O60245 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDH7O60245 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH7O60245 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH7O60245 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.28■□□□□ 0.2
PCDH7O60245 AC091304.2-201ENST00000564639 760 ntBASIC16.28■□□□□ 0.2
PCDH7O60245 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.28■□□□□ 0.2
PCDH7O60245 AL353135.1-201ENST00000606729 504 ntBASIC16.28■□□□□ 0.2
PCDH7O60245 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDH7O60245 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH7O60245 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH7O60245 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH7O60245 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDH7O60245 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDH7O60245 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
PCDH7O60245 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.27■□□□□ 0.2
PCDH7O60245 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH7O60245 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
PCDH7O60245 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
PCDH7O60245 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDH7O60245 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDH7O60245 AC008608.2-201ENST00000606089 416 ntBASIC16.27■□□□□ 0.2
PCDH7O60245 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDH7O60245 AL355877.3-201ENST00000622820 899 ntBASIC16.27■□□□□ 0.2
PCDH7O60245 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH7O60245 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH7O60245 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCDH7O60245 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH7O60245 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH7O60245 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
PCDH7O60245 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDH7O60245 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH7O60245 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDH7O60245 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDH7O60245 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDH7O60245 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
PCDH7O60245 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH7O60245 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
PCDH7O60245 PCDHB19P-201ENST00000570871 2371 ntBASIC16.27■□□□□ 0.19
PCDH7O60245 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH7O60245 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH7O60245 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH7O60245 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDH7O60245 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH7O60245 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 AL590787.1-201ENST00000568856 1315 ntBASIC16.26■□□□□ 0.19
PCDH7O60245 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PCDH7O60245 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH7O60245 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 AP002414.1-201ENST00000391405 1147 ntBASIC16.26■□□□□ 0.19
PCDH7O60245 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms