Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PEX1O43933 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.67■□□□□ 0.26
PEX1O43933 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PEX1O43933 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PEX1O43933 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.67■□□□□ 0.26
PEX1O43933 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PEX1O43933 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.67■□□□□ 0.26
PEX1O43933 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PEX1O43933 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PEX1O43933 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.67■□□□□ 0.26
PEX1O43933 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.67■□□□□ 0.26
PEX1O43933 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.67■□□□□ 0.26
PEX1O43933 AC124864.1-201ENST00000623408 392 ntBASIC16.67■□□□□ 0.26
PEX1O43933 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.67■□□□□ 0.26
PEX1O43933 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PEX1O43933 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.67■□□□□ 0.26
PEX1O43933 AC092850.2-201ENST00000623821 2697 ntBASIC16.67■□□□□ 0.26
PEX1O43933 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PEX1O43933 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PEX1O43933 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PEX1O43933 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.67■□□□□ 0.26
PEX1O43933 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PEX1O43933 AC005052.1-201ENST00000625181 2492 ntBASIC16.67■□□□□ 0.26
PEX1O43933 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.66■□□□□ 0.26
PEX1O43933 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX1O43933 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX1O43933 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
PEX1O43933 TPM4P1-201ENST00000436100 807 ntBASIC16.66■□□□□ 0.26
PEX1O43933 NUS1P1-201ENST00000446295 882 ntBASIC16.66■□□□□ 0.26
PEX1O43933 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.66■□□□□ 0.26
PEX1O43933 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.66■□□□□ 0.26
PEX1O43933 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.66■□□□□ 0.26
PEX1O43933 AC008687.5-201ENST00000593746 558 ntBASIC16.66■□□□□ 0.26
PEX1O43933 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.66■□□□□ 0.26
PEX1O43933 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX1O43933 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX1O43933 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX1O43933 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PEX1O43933 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PEX1O43933 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PEX1O43933 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX1O43933 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PEX1O43933 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PEX1O43933 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.65■□□□□ 0.26
PEX1O43933 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.65■□□□□ 0.26
PEX1O43933 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PEX1O43933 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
PEX1O43933 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX1O43933 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX1O43933 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.65■□□□□ 0.26
PEX1O43933 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PEX1O43933 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms