Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MSI1O43347 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.65■□□□□ 0.42
MSI1O43347 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.65■□□□□ 0.42
MSI1O43347 RHOQP3-201ENST00000437982 621 ntBASIC17.65■□□□□ 0.42
MSI1O43347 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.65■□□□□ 0.42
MSI1O43347 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.65■□□□□ 0.42
MSI1O43347 KRT19P2-202ENST00000557173 1012 ntBASIC17.65■□□□□ 0.42
MSI1O43347 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.65■□□□□ 0.42
MSI1O43347 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.65■□□□□ 0.42
MSI1O43347 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.65■□□□□ 0.42
MSI1O43347 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.65■□□□□ 0.42
MSI1O43347 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSI1O43347 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.65■□□□□ 0.42
MSI1O43347 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MSI1O43347 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MSI1O43347 AC025580.3-201ENST00000617932 1424 ntBASIC17.64■□□□□ 0.42
MSI1O43347 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MSI1O43347 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
MSI1O43347 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.64■□□□□ 0.41
MSI1O43347 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
MSI1O43347 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MSI1O43347 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MSI1O43347 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MSI1O43347 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MSI1O43347 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
MSI1O43347 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.64■□□□□ 0.41
MSI1O43347 AL513480.1-201ENST00000451731 511 ntBASIC17.64■□□□□ 0.41
MSI1O43347 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.64■□□□□ 0.41
MSI1O43347 AC002347.1-201ENST00000569543 541 ntBASIC17.64■□□□□ 0.41
MSI1O43347 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.64■□□□□ 0.41
MSI1O43347 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MSI1O43347 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MSI1O43347 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MSI1O43347 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.63■□□□□ 0.41
MSI1O43347 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MSI1O43347 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MSI1O43347 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
MSI1O43347 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MSI1O43347 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.63■□□□□ 0.41
MSI1O43347 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MSI1O43347 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MSI1O43347 YBX2P1-201ENST00000394192 760 ntBASIC17.63■□□□□ 0.41
MSI1O43347 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MSI1O43347 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.63■□□□□ 0.41
MSI1O43347 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
MSI1O43347 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
MSI1O43347 AC124947.2-201ENST00000547118 1133 ntBASIC17.63■□□□□ 0.41
MSI1O43347 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MSI1O43347 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.63■□□□□ 0.41
MSI1O43347 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.63■□□□□ 0.41
MSI1O43347 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
MSI1O43347 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
MSI1O43347 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MSI1O43347 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.63■□□□□ 0.41
MSI1O43347 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.63■□□□□ 0.41
MSI1O43347 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.63■□□□□ 0.41
MSI1O43347 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
MSI1O43347 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MSI1O43347 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MSI1O43347 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
MSI1O43347 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MSI1O43347 AC080080.1-201ENST00000625121 2420 ntBASIC17.62■□□□□ 0.41
MSI1O43347 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.62■□□□□ 0.41
MSI1O43347 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.62■□□□□ 0.41
MSI1O43347 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms