Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC011270.2-201ENST00000624293 2550 ntBASIC16.3■□□□□ 0.2
PCDH17O14917 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH17O14917 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH17O14917 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH17O14917 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
PCDH17O14917 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH17O14917 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDH17O14917 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDH17O14917 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDH17O14917 ACTG1P4-201ENST00000425123 1122 ntBASIC16.29■□□□□ 0.2
PCDH17O14917 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 AGGF1P2-201ENST00000426656 2106 ntBASIC16.29■□□□□ 0.2
PCDH17O14917 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDH17O14917 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH17O14917 POLD2P1-201ENST00000511220 997 ntBASIC16.29■□□□□ 0.2
PCDH17O14917 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH17O14917 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDH17O14917 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PCDH17O14917 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 AC027601.4-201ENST00000611259 610 ntBASIC16.29■□□□□ 0.2
PCDH17O14917 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH17O14917 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH17O14917 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDH17O14917 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH17O14917 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH17O14917 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDH17O14917 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PCDH17O14917 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH17O14917 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDH17O14917 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 PMS2P7-201ENST00000506558 1336 ntBASIC16.28■□□□□ 0.2
PCDH17O14917 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH17O14917 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDH17O14917 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 AC073621.1-201ENST00000392730 636 ntBASIC16.28■□□□□ 0.2
PCDH17O14917 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 AC012640.2-201ENST00000561606 901 ntBASIC16.28■□□□□ 0.2
PCDH17O14917 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH17O14917 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH17O14917 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDH17O14917 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDH17O14917 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 GPR89P-201ENST00000407924 1495 ntBASIC16.28■□□□□ 0.2
PCDH17O14917 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDH17O14917 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH17O14917 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
PCDH17O14917 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH17O14917 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH17O14917 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDH17O14917 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDH17O14917 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
PCDH17O14917 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH17O14917 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms