Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 MIR770-201ENST00000390219 98 ntBASIC16.86■□□□□ 0.29
TLR4O00206 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.86■□□□□ 0.29
TLR4O00206 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.86■□□□□ 0.29
TLR4O00206 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.86■□□□□ 0.29
TLR4O00206 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.86■□□□□ 0.29
TLR4O00206 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.86■□□□□ 0.29
TLR4O00206 AC022145.2-201ENST00000598203 171 ntBASIC16.86■□□□□ 0.29
TLR4O00206 AL645728.2-201ENST00000641974 660 ntBASIC16.86■□□□□ 0.29
TLR4O00206 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.86■□□□□ 0.29
TLR4O00206 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.86■□□□□ 0.29
TLR4O00206 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.86■□□□□ 0.29
TLR4O00206 AC012313.1-201ENST00000593393 3059 ntBASIC16.85■□□□□ 0.29
TLR4O00206 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TLR4O00206 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.85■□□□□ 0.29
TLR4O00206 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TLR4O00206 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TLR4O00206 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR4O00206 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR4O00206 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR4O00206 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.85■□□□□ 0.29
TLR4O00206 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.85■□□□□ 0.29
TLR4O00206 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.85■□□□□ 0.29
TLR4O00206 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.85■□□□□ 0.29
TLR4O00206 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR4O00206 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.85■□□□□ 0.29
TLR4O00206 MIR3197-201ENST00000582241 73 ntBASIC16.85■□□□□ 0.29
TLR4O00206 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.85■□□□□ 0.29
TLR4O00206 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TLR4O00206 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR4O00206 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.84■□□□□ 0.29
TLR4O00206 LINC00304-203ENST00000565008 1864 ntBASIC16.84■□□□□ 0.29
TLR4O00206 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR4O00206 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR4O00206 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TLR4O00206 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TLR4O00206 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TLR4O00206 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR4O00206 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.84■□□□□ 0.29
TLR4O00206 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR4O00206 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.84■□□□□ 0.29
TLR4O00206 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR4O00206 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TLR4O00206 HLA-J-203ENST00000494367 1087 ntBASIC16.84■□□□□ 0.29
TLR4O00206 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
TLR4O00206 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
TLR4O00206 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.84■□□□□ 0.29
TLR4O00206 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.84■□□□□ 0.29
TLR4O00206 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TLR4O00206 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TLR4O00206 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
TLR4O00206 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR4O00206 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TLR4O00206 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TLR4O00206 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.84■□□□□ 0.29
TLR4O00206 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TLR4O00206 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR4O00206 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TLR4O00206 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TLR4O00206 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR4O00206 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TLR4O00206 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TLR4O00206 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TLR4O00206 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TLR4O00206 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TLR4O00206 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TLR4O00206 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TLR4O00206 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TLR4O00206 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TLR4O00206 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TLR4O00206 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.83■□□□□ 0.28
TLR4O00206 LYSMD4-203ENST00000378904 2122 ntBASIC16.83■□□□□ 0.28
TLR4O00206 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TLR4O00206 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TLR4O00206 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TLR4O00206 AL671277.1-201ENST00000429656 993 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms