Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 HLA-J-202ENST00000469281 1241 ntBASIC17.22■□□□□ 0.35
AP3B1O00203 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.22■□□□□ 0.35
AP3B1O00203 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 DUX4L17-201ENST00000557360 1267 ntBASIC17.22■□□□□ 0.35
AP3B1O00203 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.22■□□□□ 0.35
AP3B1O00203 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.22■□□□□ 0.35
AP3B1O00203 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.22■□□□□ 0.35
AP3B1O00203 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.22■□□□□ 0.35
AP3B1O00203 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 PCDHB17P-201ENST00000539533 2393 ntBASIC17.22■□□□□ 0.35
AP3B1O00203 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AP3B1O00203 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
AP3B1O00203 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
AP3B1O00203 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.21■□□□□ 0.35
AP3B1O00203 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.21■□□□□ 0.35
AP3B1O00203 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
AP3B1O00203 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
AP3B1O00203 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.21■□□□□ 0.35
AP3B1O00203 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 NKAPP1-205ENST00000585790 367 ntBASIC17.21■□□□□ 0.35
AP3B1O00203 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.21■□□□□ 0.35
AP3B1O00203 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
AP3B1O00203 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.21■□□□□ 0.35
AP3B1O00203 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3B1O00203 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP3B1O00203 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.21■□□□□ 0.34
AP3B1O00203 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.21■□□□□ 0.34
AP3B1O00203 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
AP3B1O00203 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3B1O00203 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.2■□□□□ 0.34
AP3B1O00203 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3B1O00203 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.2■□□□□ 0.34
AP3B1O00203 AC243591.1-201ENST00000452967 1364 ntBASIC17.2■□□□□ 0.34
AP3B1O00203 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.2■□□□□ 0.34
AP3B1O00203 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 BX005266.1-201ENST00000473402 457 ntBASIC17.2■□□□□ 0.34
AP3B1O00203 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.2■□□□□ 0.34
AP3B1O00203 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.2■□□□□ 0.34
AP3B1O00203 AC139887.3-201ENST00000568585 713 ntBASIC17.2■□□□□ 0.34
AP3B1O00203 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3B1O00203 MTDHP3-201ENST00000594186 672 ntBASIC17.2■□□□□ 0.34
AP3B1O00203 AL139424.1-201ENST00000607572 797 ntBASIC17.2■□□□□ 0.34
AP3B1O00203 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
AP3B1O00203 AL355877.3-201ENST00000622820 899 ntBASIC17.2■□□□□ 0.34
AP3B1O00203 AL139011.1-202ENST00000642063 584 ntBASIC17.2■□□□□ 0.34
AP3B1O00203 PCDHA14-201ENST00000506751 2298 ntBASIC17.2■□□□□ 0.34
AP3B1O00203 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
AP3B1O00203 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
AP3B1O00203 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3B1O00203 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3B1O00203 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3B1O00203 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3B1O00203 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3B1O00203 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms