Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 AL512625.2-201ENST00000417533 625 ntBASIC16.73■□□□□ 0.27
VGLL3A8MV65 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 AF201337.1-201ENST00000520239 748 ntBASIC16.73■□□□□ 0.27
VGLL3A8MV65 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 AL109923.1-201ENST00000618799 583 ntBASIC16.73■□□□□ 0.27
VGLL3A8MV65 AC008694.1-202ENST00000636953 945 ntBASIC16.73■□□□□ 0.27
VGLL3A8MV65 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.73■□□□□ 0.27
VGLL3A8MV65 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VGLL3A8MV65 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 AC091799.1-201ENST00000422823 811 ntBASIC16.72■□□□□ 0.27
VGLL3A8MV65 TSPY6P-201ENST00000448518 926 ntBASIC16.72■□□□□ 0.27
VGLL3A8MV65 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VGLL3A8MV65 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.72■□□□□ 0.27
VGLL3A8MV65 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VGLL3A8MV65 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.71■□□□□ 0.27
VGLL3A8MV65 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.71■□□□□ 0.27
VGLL3A8MV65 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms