Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC061975.2-201ENST00000581722 295 ntBASIC21.18■□□□□ 0.98
RGPD3A6NKT7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.18■□□□□ 0.98
RGPD3A6NKT7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.18■□□□□ 0.98
RGPD3A6NKT7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.18■□□□□ 0.98
RGPD3A6NKT7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RGPD3A6NKT7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 SPDYE17-201ENST00000412399 783 ntBASIC21.17■□□□□ 0.98
RGPD3A6NKT7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD3A6NKT7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 KLF2P4-201ENST00000451959 1225 ntBASIC21.16■□□□□ 0.98
RGPD3A6NKT7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 C2orf69P2-201ENST00000562032 1123 ntBASIC21.16■□□□□ 0.98
RGPD3A6NKT7 AL033527.5-201ENST00000641382 801 ntBASIC21.16■□□□□ 0.98
RGPD3A6NKT7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 AC093525.8-201ENST00000624099 1342 ntBASIC21.16■□□□□ 0.98
RGPD3A6NKT7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD3A6NKT7 SLC25A24-204ENST00000569674 2357 ntBASIC21.16■□□□□ 0.98
RGPD3A6NKT7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 SDHAP3-202ENST00000515467 728 ntBASIC21.15■□□□□ 0.98
RGPD3A6NKT7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 AC074044.1-201ENST00000609673 707 ntBASIC21.15■□□□□ 0.98
RGPD3A6NKT7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD3A6NKT7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RGPD3A6NKT7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.14■□□□□ 0.98
RGPD3A6NKT7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RGPD3A6NKT7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 GPAA1P2-201ENST00000417923 928 ntBASIC21.14■□□□□ 0.97
RGPD3A6NKT7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.14■□□□□ 0.97
RGPD3A6NKT7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RGPD3A6NKT7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.13■□□□□ 0.97
RGPD3A6NKT7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms