Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ABCD1P5-201ENST00000445663 754 ntBASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 NORAD-201ENST00000565493 5339 ntBASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 AC009053.2-201ENST00000563701 2365 ntBASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 LINC01711-201ENST00000598340 967 ntBASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 AL121772.3-201ENST00000610840 674 ntBASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRGV1A0A0A0MS02 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV1A0A0A0MS02 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV1A0A0A0MS02 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV1A0A0A0MS02 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV1A0A0A0MS02 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV1A0A0A0MS02 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV1A0A0A0MS02 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 EGFEM1P-202ENST00000431685 1563 ntBASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV1A0A0A0MS02 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms