Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 AC009949.1-201ENST00000623048 1830 ntBASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX49Q9Y6V7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 AC008608.2-201ENST00000606089 416 ntBASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 AF228730.7-201ENST00000641842 219 ntBASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 AL603756.1-201ENST00000606511 2163 ntBASIC20.52■□□□□ 0.88
DDX49Q9Y6V7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.52■□□□□ 0.87
DDX49Q9Y6V7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.52■□□□□ 0.87
DDX49Q9Y6V7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 AC005915.1-201ENST00000624912 2018 ntBASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 AC243591.1-201ENST00000452967 1364 ntBASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 HNRNPDP1-201ENST00000439535 754 ntBASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 IL9RP2-201ENST00000423948 1312 ntBASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX49Q9Y6V7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
DDX49Q9Y6V7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms