Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 ADH5P3-201ENST00000433842 1137 ntBASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 HLA-J-203ENST00000494367 1087 ntBASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 MIR4515-201ENST00000584082 81 ntBASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 AL139400.1-201ENST00000366220 510 ntBASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 AC025678.2-201ENST00000562061 970 ntBASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 AC004449.1-201ENST00000564240 433 ntBASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 AC026120.1-201ENST00000611536 926 ntBASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1G3Q9Y6M4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 AL671277.1-201ENST00000429656 993 ntBASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 AC005412.3-201ENST00000580309 715 ntBASIC16.64■□□□□ 0.25
CSNK1G3Q9Y6M4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms