Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 AL023284.2-201ENST00000405850 579 ntBASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 ST20-AS1-201ENST00000560255 4223 ntBASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TRAPPC1Q9Y5R8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 AC087386.2-201ENST00000623212 4637 ntBASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 SLC25A1P3-201ENST00000395415 828 ntBASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 AC009065.1-201ENST00000564055 1225 ntBASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 AC120498.8-201ENST00000614275 531 ntBASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 AC110285.6-201ENST00000617652 491 ntBASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAPPC1Q9Y5R8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 AL603832.2-201ENST00000566195 2125 ntBASIC12.92□□□□□ -0.34
TRAPPC1Q9Y5R8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms