Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 AC005332.1-201ENST00000577698 1310 ntBASIC19.59■□□□□ 0.73
USP25Q9UHP3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP25Q9UHP3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.59■□□□□ 0.73
USP25Q9UHP3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP25Q9UHP3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP25Q9UHP3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP25Q9UHP3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP25Q9UHP3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.58■□□□□ 0.73
USP25Q9UHP3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP25Q9UHP3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP25Q9UHP3 AC068418.2-201ENST00000577309 3703 ntBASIC19.58■□□□□ 0.73
USP25Q9UHP3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.58■□□□□ 0.73
USP25Q9UHP3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP25Q9UHP3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP25Q9UHP3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP25Q9UHP3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP25Q9UHP3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP25Q9UHP3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
USP25Q9UHP3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP25Q9UHP3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.58■□□□□ 0.72
USP25Q9UHP3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP25Q9UHP3 FAM86EP-206ENST00000510506 987 ntBASIC19.58■□□□□ 0.72
USP25Q9UHP3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.58■□□□□ 0.72
USP25Q9UHP3 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.58■□□□□ 0.72
USP25Q9UHP3 AC011467.2-201ENST00000598425 242 ntBASIC19.58■□□□□ 0.72
USP25Q9UHP3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.58■□□□□ 0.72
USP25Q9UHP3 AC022188.1-201ENST00000620960 1664 ntBASIC19.58■□□□□ 0.72
USP25Q9UHP3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
USP25Q9UHP3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP25Q9UHP3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
USP25Q9UHP3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP25Q9UHP3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP25Q9UHP3 AC092364.2-201ENST00000596710 2692 ntBASIC19.58■□□□□ 0.72
USP25Q9UHP3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 AC016734.2-201ENST00000624325 1377 ntBASIC19.57■□□□□ 0.72
USP25Q9UHP3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 NTF6B-201ENST00000591913 560 ntBASIC19.57■□□□□ 0.72
USP25Q9UHP3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.57■□□□□ 0.72
USP25Q9UHP3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP25Q9UHP3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP25Q9UHP3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP25Q9UHP3 AL513477.1-201ENST00000602865 2407 ntBASIC19.56■□□□□ 0.72
USP25Q9UHP3 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.56■□□□□ 0.72
USP25Q9UHP3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.56■□□□□ 0.72
USP25Q9UHP3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms