Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.7■□□□□ 0.9
HMG20BQ9P0W2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.7■□□□□ 0.9
HMG20BQ9P0W2 AL078644.1-201ENST00000609881 752 ntBASIC20.7■□□□□ 0.9
HMG20BQ9P0W2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20BQ9P0W2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HMG20BQ9P0W2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20BQ9P0W2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20BQ9P0W2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20BQ9P0W2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 AL513480.1-201ENST00000451731 511 ntBASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 DUX4L17-201ENST00000557360 1267 ntBASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 AC134684.3-201ENST00000641758 218 ntBASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.69■□□□□ 0.9
HMG20BQ9P0W2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 HTR5BP-201ENST00000430851 1154 ntBASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HMG20BQ9P0W2 AC092919.2-201ENST00000623631 1645 ntBASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 AC004967.1-201ENST00000453589 447 ntBASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 MIR4469-201ENST00000583919 79 ntBASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 FRMD8P1-201ENST00000440433 1524 ntBASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20BQ9P0W2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms