Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AC092910.1-201ENST00000482027 1129 ntBASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AC136632.2-201ENST00000512891 861 ntBASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AL356488.2-201ENST00000602755 427 ntBASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AC079781.4-201ENST00000641908 219 ntBASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AC009053.2-201ENST00000563701 2365 ntBASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 FRMD8P1-201ENST00000440433 1524 ntBASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 RPS2P28-201ENST00000314255 741 ntBASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 AC116407.3-201ENST00000623905 1129 ntBASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.5■□□□□ 0.23
CUEDC1Q9NWM3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms