Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRMT13Q9NUP7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
TRMT13Q9NUP7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.57■□□□□ 0.56
TRMT13Q9NUP7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRMT13Q9NUP7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.57■□□□□ 0.56
TRMT13Q9NUP7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRMT13Q9NUP7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 MIR3909-201ENST00000579518 119 ntBASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
TRMT13Q9NUP7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 AC027369.6-201ENST00000525520 931 ntBASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRMT13Q9NUP7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 AC100757.3-201ENST00000622361 1406 ntBASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 AC131009.4-201ENST00000624048 1740 ntBASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRMT13Q9NUP7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRMT13Q9NUP7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRMT13Q9NUP7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms