Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC145285.3-201ENST00000564603 959 ntBASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 Z83851.2-201ENST00000609564 659 ntBASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 GGTLC5P-201ENST00000617623 998 ntBASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 ZNF259P1-201ENST00000407656 1365 ntBASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 AL021920.2-201ENST00000624828 1351 ntBASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 PAWRP1-201ENST00000451083 565 ntBASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 SLC25A1P1-201ENST00000528351 927 ntBASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 DUX4L17-201ENST00000557360 1267 ntBASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
PRDM9Q9NQV7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 AC104109.2-201ENST00000602919 1418 ntBASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 PI4KAP1-204ENST00000612579 1703 ntBASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 AC009947.1-201ENST00000444350 727 ntBASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 AC108751.1-201ENST00000490852 363 ntBASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 AC106730.1-201ENST00000566722 1090 ntBASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 AP003400.6-201ENST00000624698 740 ntBASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRDM9Q9NQV7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms