Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 FGFR3P6-201ENST00000457012 610 ntBASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 AC064862.7-201ENST00000604520 867 ntBASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC40Q9H9A6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 SCARNA2-201ENST00000458748 420 ntBASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC40Q9H9A6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 AL021920.2-201ENST00000624828 1351 ntBASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 SART3-203ENST00000546611 1184 ntBASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 DUX4L17-201ENST00000557360 1267 ntBASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 AL139424.1-201ENST00000607572 797 ntBASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC40Q9H9A6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms