Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 AC079140.1-201ENST00000508039 487 ntBASIC17.72■□□□□ 0.43
LRRC3Q9BY71 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 DUX4L17-201ENST00000557360 1267 ntBASIC17.72■□□□□ 0.43
LRRC3Q9BY71 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC3Q9BY71 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 SPDYE11-202ENST00000450699 704 ntBASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 SPDYE9P-201ENST00000570642 692 ntBASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AL009183.1-201ENST00000603760 355 ntBASIC17.71■□□□□ 0.43
LRRC3Q9BY71 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 SPDYE10P-202ENST00000612005 668 ntBASIC17.71■□□□□ 0.43
LRRC3Q9BY71 SPDYE8P-202ENST00000612377 668 ntBASIC17.71■□□□□ 0.43
LRRC3Q9BY71 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AC012569.1-201ENST00000591191 1524 ntBASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 GNAS-203ENST00000306120 1878 ntBASIC17.71■□□□□ 0.43
LRRC3Q9BY71 AC016396.2-201ENST00000562575 1417 ntBASIC17.71■□□□□ 0.43
LRRC3Q9BY71 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC3Q9BY71 FZD10-202ENST00000539839 3282 ntBASIC17.71■□□□□ 0.42
LRRC3Q9BY71 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
LRRC3Q9BY71 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 AL353732.1-201ENST00000569618 1459 ntBASIC17.7■□□□□ 0.42
LRRC3Q9BY71 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 FAM58DP-201ENST00000428076 619 ntBASIC17.7■□□□□ 0.42
LRRC3Q9BY71 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 AL135744.1-201ENST00000565098 629 ntBASIC17.7■□□□□ 0.42
LRRC3Q9BY71 RARRES2P8-201ENST00000566335 367 ntBASIC17.7■□□□□ 0.42
LRRC3Q9BY71 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 SLC22A20-204ENST00000530038 1673 ntBASIC17.7■□□□□ 0.42
LRRC3Q9BY71 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 AKAP8P1-201ENST00000434743 1349 ntBASIC17.7■□□□□ 0.42
LRRC3Q9BY71 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC3Q9BY71 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC3Q9BY71 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms