Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 AL353593.2-201ENST00000602529 1483 ntBASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.37□□□□□ -0.11
PCGF1Q9BSM1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 AC132938.5-201ENST00000624980 1813 ntBASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 AC003669.1-201ENST00000334569 611 ntBASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 AC005104.2-201ENST00000427818 678 ntBASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 STK19B-204ENST00000512515 211 ntBASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 AC019129.2-201ENST00000609837 1235 ntBASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 AC116407.3-201ENST00000623905 1129 ntBASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCGF1Q9BSM1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 AF228730.7-201ENST00000641842 219 ntBASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms