Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
CGREF1Q99674 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGREF1Q99674 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CGREF1Q99674 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.25■□□□□ 0.19
CGREF1Q99674 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CGREF1Q99674 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CGREF1Q99674 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.24■□□□□ 0.19
CGREF1Q99674 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.24■□□□□ 0.19
CGREF1Q99674 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.24■□□□□ 0.19
CGREF1Q99674 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CGREF1Q99674 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CGREF1Q99674 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CGREF1Q99674 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.24■□□□□ 0.19
CGREF1Q99674 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.24■□□□□ 0.19
CGREF1Q99674 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.24■□□□□ 0.19
CGREF1Q99674 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.24■□□□□ 0.19
CGREF1Q99674 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.24■□□□□ 0.19
CGREF1Q99674 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.24■□□□□ 0.19
CGREF1Q99674 AC083849.1-201ENST00000615227 514 ntBASIC16.24■□□□□ 0.19
CGREF1Q99674 AC133561.5-201ENST00000635547 218 ntBASIC16.24■□□□□ 0.19
CGREF1Q99674 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CGREF1Q99674 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.24■□□□□ 0.19
CGREF1Q99674 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 AL391256.1-201ENST00000443260 1855 ntBASIC16.24■□□□□ 0.19
CGREF1Q99674 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CGREF1Q99674 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CGREF1Q99674 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.24■□□□□ 0.19
CGREF1Q99674 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.24■□□□□ 0.19
CGREF1Q99674 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGREF1Q99674 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CGREF1Q99674 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CGREF1Q99674 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CGREF1Q99674 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CGREF1Q99674 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.23■□□□□ 0.19
CGREF1Q99674 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CGREF1Q99674 TUBB8P12-201ENST00000308911 1335 ntBASIC16.23■□□□□ 0.19
CGREF1Q99674 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 TUBB7P-202ENST00000428444 1305 ntBASIC16.23■□□□□ 0.19
CGREF1Q99674 TUBB8P7-204ENST00000567960 1332 ntBASIC16.23■□□□□ 0.19
CGREF1Q99674 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.23■□□□□ 0.19
CGREF1Q99674 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CGREF1Q99674 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 AC003669.1-201ENST00000334569 611 ntBASIC16.23■□□□□ 0.19
CGREF1Q99674 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
CGREF1Q99674 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.23■□□□□ 0.19
CGREF1Q99674 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.23■□□□□ 0.19
CGREF1Q99674 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.23■□□□□ 0.19
CGREF1Q99674 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CGREF1Q99674 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 AC097493.4-201ENST00000641197 219 ntBASIC16.23■□□□□ 0.19
CGREF1Q99674 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 AC092364.2-201ENST00000596710 2692 ntBASIC16.23■□□□□ 0.19
CGREF1Q99674 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.23■□□□□ 0.19
CGREF1Q99674 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CGREF1Q99674 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CGREF1Q99674 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CGREF1Q99674 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.22■□□□□ 0.19
CGREF1Q99674 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.22■□□□□ 0.19
CGREF1Q99674 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CGREF1Q99674 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CGREF1Q99674 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CGREF1Q99674 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms