Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5RAP2Q96SN8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 KLF2P3-201ENST00000451977 1087 ntBASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 AC069120.2-201ENST00000524091 540 ntBASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 AL138918.1-201ENST00000568306 659 ntBASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP2Q96SN8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 MRPS18AP1-201ENST00000414458 589 ntBASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP2Q96SN8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 MIR661-201ENST00000384842 89 ntBASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 KRT8P23-201ENST00000560090 1207 ntBASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP2Q96SN8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP2Q96SN8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms