Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 INGX-201ENST00000359239 846 ntBASIC13.87□□□□□ -0.19
RAB40CQ96S21 HMGA1P5-201ENST00000412453 271 ntBASIC13.87□□□□□ -0.19
RAB40CQ96S21 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.87□□□□□ -0.19
RAB40CQ96S21 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 AC109462.3-201ENST00000573934 613 ntBASIC13.87□□□□□ -0.19
RAB40CQ96S21 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 AL136038.4-201ENST00000603606 1261 ntBASIC13.87□□□□□ -0.19
RAB40CQ96S21 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 AL365203.3-201ENST00000609742 2057 ntBASIC13.87□□□□□ -0.19
RAB40CQ96S21 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 AL391807.1-203ENST00000604392 2365 ntBASIC13.87□□□□□ -0.19
RAB40CQ96S21 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC103702.1-201ENST00000548801 2630 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 FRMD8P1-201ENST00000440433 1524 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC087499.1-201ENST00000418141 1075 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC068472.1-201ENST00000474589 881 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC019129.2-201ENST00000609837 1235 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AC006538.1-201ENST00000567905 1585 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 AL391256.1-201ENST00000443260 1855 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 KRT18P22-201ENST00000402024 1347 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 GPR89P-201ENST00000407924 1495 ntBASIC13.86□□□□□ -0.19
RAB40CQ96S21 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms