Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.18■□□□□ 0.82
NEK1Q96PY6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEK1Q96PY6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.17■□□□□ 0.82
NEK1Q96PY6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AC004870.1-201ENST00000315132 882 ntBASIC20.17■□□□□ 0.82
NEK1Q96PY6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AC073621.1-201ENST00000392730 636 ntBASIC20.17■□□□□ 0.82
NEK1Q96PY6 KRT18P27-201ENST00000427733 1299 ntBASIC20.17■□□□□ 0.82
NEK1Q96PY6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 AL021920.2-201ENST00000624828 1351 ntBASIC20.17■□□□□ 0.82
NEK1Q96PY6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.17■□□□□ 0.82
NEK1Q96PY6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEK1Q96PY6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 AL031008.1-201ENST00000619963 541 ntBASIC20.16■□□□□ 0.82
NEK1Q96PY6 AC148477.8-201ENST00000624298 468 ntBASIC20.16■□□□□ 0.82
NEK1Q96PY6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEK1Q96PY6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 PI4KAP1-204ENST00000612579 1703 ntBASIC20.16■□□□□ 0.82
NEK1Q96PY6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NEK1Q96PY6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 KRT18P67-201ENST00000432816 1264 ntBASIC20.15■□□□□ 0.82
NEK1Q96PY6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 AC104692.2-201ENST00000603054 253 ntBASIC20.15■□□□□ 0.82
NEK1Q96PY6 AL805961.1-202ENST00000641562 540 ntBASIC20.15■□□□□ 0.82
NEK1Q96PY6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms