Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
COL21A1Q96P44 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.16■□□□□ 0.18
COL21A1Q96P44 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
COL21A1Q96P44 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
COL21A1Q96P44 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.16■□□□□ 0.18
COL21A1Q96P44 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
COL21A1Q96P44 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
COL21A1Q96P44 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL21A1Q96P44 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.15■□□□□ 0.18
COL21A1Q96P44 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 AC073592.5-201ENST00000624854 528 ntBASIC16.15■□□□□ 0.18
COL21A1Q96P44 AC005915.1-201ENST00000624912 2018 ntBASIC16.15■□□□□ 0.18
COL21A1Q96P44 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 AP000867.4-201ENST00000641616 219 ntBASIC16.15■□□□□ 0.18
COL21A1Q96P44 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 AC092053.1-201ENST00000605787 1936 ntBASIC16.15■□□□□ 0.18
COL21A1Q96P44 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COL21A1Q96P44 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL21A1Q96P44 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COL21A1Q96P44 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COL21A1Q96P44 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COL21A1Q96P44 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.18
COL21A1Q96P44 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 PMPCAP1-201ENST00000508114 1576 ntBASIC16.14■□□□□ 0.17
COL21A1Q96P44 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 RBM17P3-201ENST00000417687 1192 ntBASIC16.14■□□□□ 0.17
COL21A1Q96P44 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 UNC93B7-201ENST00000509439 705 ntBASIC16.14■□□□□ 0.17
COL21A1Q96P44 AC106795.1-205ENST00000512851 1056 ntBASIC16.14■□□□□ 0.17
COL21A1Q96P44 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 AP001269.4-201ENST00000609611 512 ntBASIC16.14■□□□□ 0.17
COL21A1Q96P44 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms