Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00615Q96LM1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00615Q96LM1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00615Q96LM1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 HMGA1P7-201ENST00000406908 502 ntBASIC16.53■□□□□ 0.24
LINC00615Q96LM1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.53■□□□□ 0.24
LINC00615Q96LM1 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 AL513190.1-201ENST00000621254 727 ntBASIC16.53■□□□□ 0.24
LINC00615Q96LM1 AC092865.6-201ENST00000642101 219 ntBASIC16.53■□□□□ 0.24
LINC00615Q96LM1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00615Q96LM1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 MCCD1P2-201ENST00000423228 335 ntBASIC16.52■□□□□ 0.24
LINC00615Q96LM1 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 AC074386.1-202ENST00000463561 864 ntBASIC16.52■□□□□ 0.24
LINC00615Q96LM1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 MIR3909-201ENST00000579518 119 ntBASIC16.52■□□□□ 0.24
LINC00615Q96LM1 CYP2A7P1-201ENST00000595391 815 ntBASIC16.52■□□□□ 0.24
LINC00615Q96LM1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC00615Q96LM1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
LINC00615Q96LM1 AL645728.1-201ENST00000366221 2101 ntBASIC16.52■□□□□ 0.23
LINC00615Q96LM1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00615Q96LM1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00615Q96LM1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00615Q96LM1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00615Q96LM1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00615Q96LM1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00615Q96LM1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 AC090340.1-201ENST00000620778 4980 ntBASIC16.51■□□□□ 0.23
LINC00615Q96LM1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 AL391256.1-201ENST00000443260 1855 ntBASIC16.51■□□□□ 0.23
LINC00615Q96LM1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.51■□□□□ 0.23
LINC00615Q96LM1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms