Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.07■□□□□ 0.48
CALR3Q96L12 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CALR3Q96L12 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 SIGLEC16-201ENST00000599858 1437 ntBASIC18.06■□□□□ 0.48
CALR3Q96L12 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CALR3Q96L12 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.06■□□□□ 0.48
CALR3Q96L12 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.06■□□□□ 0.48
CALR3Q96L12 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CALR3Q96L12 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.06■□□□□ 0.48
CALR3Q96L12 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CALR3Q96L12 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 POM121L3P-201ENST00000419331 1163 ntBASIC18.06■□□□□ 0.48
CALR3Q96L12 DRAXINP1-201ENST00000437611 948 ntBASIC18.06■□□□□ 0.48
CALR3Q96L12 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.06■□□□□ 0.48
CALR3Q96L12 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CALR3Q96L12 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.06■□□□□ 0.48
CALR3Q96L12 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CALR3Q96L12 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.06■□□□□ 0.48
CALR3Q96L12 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CALR3Q96L12 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.06■□□□□ 0.48
CALR3Q96L12 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CALR3Q96L12 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CALR3Q96L12 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.05■□□□□ 0.48
CALR3Q96L12 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 PCDHB17P-201ENST00000539533 2393 ntBASIC18.05■□□□□ 0.48
CALR3Q96L12 AC233702.3-201ENST00000578656 1387 ntBASIC18.05■□□□□ 0.48
CALR3Q96L12 LINC00895-201ENST00000629028 1637 ntBASIC18.05■□□□□ 0.48
CALR3Q96L12 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CALR3Q96L12 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CALR3Q96L12 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.05■□□□□ 0.48
CALR3Q96L12 AL513523.2-202ENST00000427283 2040 ntBASIC18.05■□□□□ 0.48
CALR3Q96L12 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.05■□□□□ 0.48
CALR3Q96L12 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.05■□□□□ 0.48
CALR3Q96L12 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CALR3Q96L12 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CALR3Q96L12 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.05■□□□□ 0.48
CALR3Q96L12 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.05■□□□□ 0.48
CALR3Q96L12 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.05■□□□□ 0.48
CALR3Q96L12 AP000867.4-201ENST00000641616 219 ntBASIC18.05■□□□□ 0.48
CALR3Q96L12 AL139011.1-202ENST00000642063 584 ntBASIC18.05■□□□□ 0.48
CALR3Q96L12 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.05■□□□□ 0.48
CALR3Q96L12 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CALR3Q96L12 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CALR3Q96L12 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CALR3Q96L12 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CALR3Q96L12 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALR3Q96L12 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CALR3Q96L12 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.04■□□□□ 0.48
CALR3Q96L12 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 HLA-A-202ENST00000376806 1854 ntBASIC18.04■□□□□ 0.48
CALR3Q96L12 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CALR3Q96L12 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 AP002414.1-201ENST00000391405 1147 ntBASIC18.04■□□□□ 0.48
CALR3Q96L12 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.04■□□□□ 0.48
CALR3Q96L12 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CALR3Q96L12 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 AP005901.3-202ENST00000581653 237 ntBASIC18.04■□□□□ 0.48
CALR3Q96L12 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CALR3Q96L12 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CALR3Q96L12 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALR3Q96L12 AC016734.2-201ENST00000624325 1377 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms