Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC11Q96DB2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.57■□□□□ 0.4
HDAC11Q96DB2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC11Q96DB2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDAC11Q96DB2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 AC092068.3-201ENST00000587894 2016 ntBASIC17.56■□□□□ 0.4
HDAC11Q96DB2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 AP002414.1-201ENST00000391405 1147 ntBASIC17.56■□□□□ 0.4
HDAC11Q96DB2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.56■□□□□ 0.4
HDAC11Q96DB2 AC139887.3-201ENST00000568585 713 ntBASIC17.56■□□□□ 0.4
HDAC11Q96DB2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.56■□□□□ 0.4
HDAC11Q96DB2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.55■□□□□ 0.4
HDAC11Q96DB2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 AC004706.3-202ENST00000621574 984 ntBASIC17.55■□□□□ 0.4
HDAC11Q96DB2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 AC009053.2-201ENST00000563701 2365 ntBASIC17.55■□□□□ 0.4
HDAC11Q96DB2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 AC105020.1-201ENST00000435356 2205 ntBASIC17.55■□□□□ 0.4
HDAC11Q96DB2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC11Q96DB2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC11Q96DB2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms