Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
APH1AQ96BI3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APH1AQ96BI3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.11■□□□□ 0.01
APH1AQ96BI3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.11■□□□□ 0.01
APH1AQ96BI3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.1■□□□□ 0.01
APH1AQ96BI3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 AP000347.1-202ENST00000435868 847 ntBASIC15.1■□□□□ 0.01
APH1AQ96BI3 VN2R19P-201ENST00000442399 1052 ntBASIC15.1■□□□□ 0.01
APH1AQ96BI3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
APH1AQ96BI3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APH1AQ96BI3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 MIR940-201ENST00000401276 94 ntBASIC15.09■□□□□ 0.01
APH1AQ96BI3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 AC007967.2-201ENST00000432613 625 ntBASIC15.09■□□□□ 0.01
APH1AQ96BI3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 RNA5SP416-201ENST00000516838 111 ntBASIC15.09■□□□□ 0.01
APH1AQ96BI3 FAM197Y3-203ENST00000618346 717 ntBASIC15.09■□□□□ 0.01
APH1AQ96BI3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.09■□□□□ 0.01
APH1AQ96BI3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APH1AQ96BI3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
APH1AQ96BI3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
APH1AQ96BI3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.08■□□□□ 0.01
APH1AQ96BI3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms