Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS1Q92902 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS1Q92902 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.69■□□□□ 0.1
HPS1Q92902 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.69■□□□□ 0.1
HPS1Q92902 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.69■□□□□ 0.1
HPS1Q92902 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.69■□□□□ 0.1
HPS1Q92902 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.69■□□□□ 0.1
HPS1Q92902 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
HPS1Q92902 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.69■□□□□ 0.1
HPS1Q92902 HYMAI.1-201ENST00000620949 238 ntBASIC15.69■□□□□ 0.1
HPS1Q92902 AC093458.2-201ENST00000623150 629 ntBASIC15.69■□□□□ 0.1
HPS1Q92902 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS1Q92902 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
HPS1Q92902 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 AL355312.1-201ENST00000407115 2176 ntBASIC15.69■□□□□ 0.1
HPS1Q92902 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS1Q92902 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.68■□□□□ 0.1
HPS1Q92902 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.68■□□□□ 0.1
HPS1Q92902 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HPS1Q92902 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 NORAD-201ENST00000565493 5339 ntBASIC15.68■□□□□ 0.1
HPS1Q92902 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
HPS1Q92902 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.68■□□□□ 0.1
HPS1Q92902 KRT18P41-201ENST00000518924 1277 ntBASIC15.68■□□□□ 0.1
HPS1Q92902 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.68■□□□□ 0.1
HPS1Q92902 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
HPS1Q92902 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.68■□□□□ 0.1
HPS1Q92902 AC083849.1-201ENST00000615227 514 ntBASIC15.68■□□□□ 0.1
HPS1Q92902 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HPS1Q92902 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.68■□□□□ 0.1
HPS1Q92902 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
HPS1Q92902 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS1Q92902 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HPS1Q92902 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms