Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AL139339.2-201ENST00000608063 657 ntBASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC112907.3-201ENST00000577781 2400 ntBASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC234782.1-201ENST00000451950 919 ntBASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC073314.1-201ENST00000568729 2216 ntBASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC044849.1-201ENST00000519737 1188 ntBASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AL162726.2-201ENST00000438986 1017 ntBASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE2Q8WXH0 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 KRT18P41-201ENST00000518924 1277 ntBASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 RN7SL163P-201ENST00000583100 276 ntBASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 NOC2LP1-201ENST00000450578 752 ntBASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 AL160314.3-201ENST00000556041 767 ntBASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms