Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 MIR4745-201ENST00000577608 62 ntBASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 AC093512.1-201ENST00000617969 520 ntBASIC20.08■□□□□ 0.81
NKX2-3Q8TAU0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NKX2-3Q8TAU0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.08■□□□□ 0.8
NKX2-3Q8TAU0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
NKX2-3Q8TAU0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 SLC22A20-204ENST00000530038 1673 ntBASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 MRPL20P1-201ENST00000400819 433 ntBASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 HLA-J-202ENST00000469281 1241 ntBASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-3Q8TAU0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-3Q8TAU0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-3Q8TAU0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-3Q8TAU0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms