Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.97■□□□□ 0.15
NUP43Q8NFH3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUP43Q8NFH3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NUP43Q8NFH3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.97■□□□□ 0.15
NUP43Q8NFH3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.97■□□□□ 0.15
NUP43Q8NFH3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NUP43Q8NFH3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.97■□□□□ 0.15
NUP43Q8NFH3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.96■□□□□ 0.15
NUP43Q8NFH3 TUBB7P-202ENST00000428444 1305 ntBASIC15.96■□□□□ 0.15
NUP43Q8NFH3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.96■□□□□ 0.15
NUP43Q8NFH3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 AP002414.1-201ENST00000391405 1147 ntBASIC15.96■□□□□ 0.15
NUP43Q8NFH3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 AF238378.1-201ENST00000526806 358 ntBASIC15.96■□□□□ 0.15
NUP43Q8NFH3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 AC139887.3-201ENST00000568585 713 ntBASIC15.96■□□□□ 0.15
NUP43Q8NFH3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 AL139424.1-201ENST00000607572 797 ntBASIC15.96■□□□□ 0.15
NUP43Q8NFH3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 AC243591.1-201ENST00000452967 1364 ntBASIC15.96■□□□□ 0.15
NUP43Q8NFH3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUP43Q8NFH3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
NUP43Q8NFH3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
NUP43Q8NFH3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NUP43Q8NFH3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.96■□□□□ 0.14
NUP43Q8NFH3 PCDHB17P-201ENST00000539533 2393 ntBASIC15.95■□□□□ 0.14
NUP43Q8NFH3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 AC078925.2-201ENST00000624013 1973 ntBASIC15.95■□□□□ 0.14
NUP43Q8NFH3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.95■□□□□ 0.14
NUP43Q8NFH3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.94■□□□□ 0.14
NUP43Q8NFH3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms