Protein–RNA interactions for Protein: Q8NBF2

NHLRC2, NHL repeat-containing protein 2, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC2Q8NBF2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 BX276092.7-203ENST00000637198 1536 ntBASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
NHLRC2Q8NBF2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 AC024243.1-201ENST00000609234 778 ntBASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 AC026471.5-201ENST00000615068 467 ntBASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 AC113410.3-201ENST00000623366 203 ntBASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NHLRC2Q8NBF2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NHLRC2Q8NBF2 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.2□□□□□ -0.3
NHLRC2Q8NBF2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms