Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC087163.2-201ENST00000457299 853 ntBASIC17.39■□□□□ 0.37
KDM1BQ8NB78 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC018845.2-201ENST00000568326 409 ntBASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC005829.1-201ENST00000570002 483 ntBASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC023141.13-201ENST00000604991 943 ntBASIC17.39■□□□□ 0.37
KDM1BQ8NB78 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC004877.2-201ENST00000623941 599 ntBASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AC079781.4-201ENST00000641908 219 ntBASIC17.39■□□□□ 0.37
KDM1BQ8NB78 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDM1BQ8NB78 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 KRT19P2-202ENST00000557173 1012 ntBASIC17.38■□□□□ 0.37
KDM1BQ8NB78 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 AC055717.3-201ENST00000622967 595 ntBASIC17.38■□□□□ 0.37
KDM1BQ8NB78 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.38■□□□□ 0.37
KDM1BQ8NB78 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 BCL2-203ENST00000589955 5011 ntBASIC17.37■□□□□ 0.37
KDM1BQ8NB78 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 AL691403.2-201ENST00000618460 490 ntBASIC17.37■□□□□ 0.37
KDM1BQ8NB78 AL513190.1-201ENST00000621254 727 ntBASIC17.37■□□□□ 0.37
KDM1BQ8NB78 BCAR1-209ENST00000546196 1340 ntBASIC17.37■□□□□ 0.37
KDM1BQ8NB78 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDM1BQ8NB78 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDM1BQ8NB78 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms