Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 AC073592.5-201ENST00000624854 528 ntBASIC16.89■□□□□ 0.29
SNX31Q8N9S9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX31Q8N9S9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 AC093525.9-201ENST00000624961 1746 ntBASIC16.88■□□□□ 0.29
SNX31Q8N9S9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 NUS1P2-201ENST00000417358 873 ntBASIC16.88■□□□□ 0.29
SNX31Q8N9S9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 AC012615.1-201ENST00000565797 1299 ntBASIC16.88■□□□□ 0.29
SNX31Q8N9S9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 AC114341.1-201ENST00000618070 349 ntBASIC16.88■□□□□ 0.29
SNX31Q8N9S9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX31Q8N9S9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 AC009336.1-201ENST00000608941 1553 ntBASIC16.87■□□□□ 0.29
SNX31Q8N9S9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 AC003669.1-201ENST00000334569 611 ntBASIC16.87■□□□□ 0.29
SNX31Q8N9S9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 ATP5G2P1-201ENST00000433580 426 ntBASIC16.87■□□□□ 0.29
SNX31Q8N9S9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 INTS4P1-201ENST00000438455 1935 ntBASIC16.87■□□□□ 0.29
SNX31Q8N9S9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX31Q8N9S9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms