Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSMEM1Q8N8F7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 RBM17P3-201ENST00000417687 1192 ntBASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 LINC00982-205ENST00000420957 435 ntBASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSMEM1Q8N8F7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 UPK3BP1-201ENST00000428678 509 ntBASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 AC023824.1-201ENST00000562945 2975 ntBASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 TUBB8P12-201ENST00000308911 1335 ntBASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 TUBB7P-202ENST00000428444 1305 ntBASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 TUBB8P7-204ENST00000567960 1332 ntBASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSMEM1Q8N8F7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 AP002414.1-201ENST00000391405 1147 ntBASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 FOSL1P1-201ENST00000511041 816 ntBASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 AP002490.2-201ENST00000524791 560 ntBASIC15.63■□□□□ 0.09
LSMEM1Q8N8F7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms