Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SCML4Q8N228 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCML4Q8N228 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCML4Q8N228 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
SCML4Q8N228 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.64■□□□□ 0.41
SCML4Q8N228 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 PCDHB17P-201ENST00000539533 2393 ntBASIC17.64■□□□□ 0.41
SCML4Q8N228 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 YBX2P1-201ENST00000394192 760 ntBASIC17.64■□□□□ 0.41
SCML4Q8N228 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 AC140658.5-201ENST00000438532 169 ntBASIC17.64■□□□□ 0.41
SCML4Q8N228 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.64■□□□□ 0.41
SCML4Q8N228 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SCML4Q8N228 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.64■□□□□ 0.41
SCML4Q8N228 CYP2A7P1-201ENST00000595391 815 ntBASIC17.64■□□□□ 0.41
SCML4Q8N228 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.64■□□□□ 0.41
SCML4Q8N228 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SCML4Q8N228 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SCML4Q8N228 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.64■□□□□ 0.41
SCML4Q8N228 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCML4Q8N228 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
SCML4Q8N228 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCML4Q8N228 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCML4Q8N228 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.63■□□□□ 0.41
SCML4Q8N228 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.63■□□□□ 0.41
SCML4Q8N228 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SCML4Q8N228 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.63■□□□□ 0.41
SCML4Q8N228 DNAJB3-201ENST00000446806 729 ntBASIC17.63■□□□□ 0.41
SCML4Q8N228 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
SCML4Q8N228 AC068137.2-201ENST00000605408 478 ntBASIC17.63■□□□□ 0.41
SCML4Q8N228 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.63■□□□□ 0.41
SCML4Q8N228 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.63■□□□□ 0.41
SCML4Q8N228 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCML4Q8N228 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SCML4Q8N228 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SCML4Q8N228 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCML4Q8N228 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.63■□□□□ 0.41
SCML4Q8N228 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 AC090340.1-201ENST00000620778 4980 ntBASIC17.62■□□□□ 0.41
SCML4Q8N228 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 BX842568.4-201ENST00000421222 227 ntBASIC17.62■□□□□ 0.41
SCML4Q8N228 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 AC109635.5-201ENST00000533593 962 ntBASIC17.62■□□□□ 0.41
SCML4Q8N228 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.62■□□□□ 0.41
SCML4Q8N228 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.62■□□□□ 0.41
SCML4Q8N228 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.62■□□□□ 0.41
SCML4Q8N228 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.62■□□□□ 0.41
SCML4Q8N228 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SCML4Q8N228 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms