Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 MPDU1-223ENST00000582151 728 ntBASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COL27A1Q8IZC6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 HLA-V-201ENST00000429037 534 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AL512638.1-201ENST00000457493 794 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 RNA5SP410-201ENST00000516285 106 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 RN7SL828P-201ENST00000607615 303 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AC087499.5-201ENST00000452760 1342 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 MTND6P24-201ENST00000440466 518 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 IGHV3-71-201ENST00000523324 359 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AC027307.3-201ENST00000594262 1100 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AC004233.3-201ENST00000607794 1269 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AP001350.2-201ENST00000625104 1094 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 AL671710.1-201ENST00000610245 2349 ntBASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.8■□□□□ 0.12
COL27A1Q8IZC6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 AL353705.2-201ENST00000428243 662 ntBASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 AL079307.3-201ENST00000556114 283 ntBASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL27A1Q8IZC6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms