Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 AC011676.5-201ENST00000624864 2660 ntBASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 PTCHD3P3-201ENST00000403073 906 ntBASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 AF186996.4-201ENST00000467186 377 ntBASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 DUX4L17-201ENST00000557360 1267 ntBASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC65Q8IXS2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 KRT18P67-201ENST00000432816 1264 ntBASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 AC079781.3-201ENST00000449110 356 ntBASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 AC018712.1-201ENST00000455767 687 ntBASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 AL805961.1-202ENST00000641562 540 ntBASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC65Q8IXS2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 KRT18P27-201ENST00000427733 1299 ntBASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 PAWRP1-201ENST00000451083 565 ntBASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 AP002490.2-201ENST00000524791 560 ntBASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 AF228730.7-201ENST00000641842 219 ntBASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC65Q8IXS2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms