Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 UPK3BP1-201ENST00000428678 509 ntBASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 FOSL1P1-201ENST00000511041 816 ntBASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00346Q8IVM7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms