Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC28Q86X40 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC28Q86X40 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 KRT18P1-202ENST00000452408 1331 ntBASIC15.22■□□□□ 0.03
LRRC28Q86X40 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 MIR3180-1-201ENST00000580374 94 ntBASIC15.22■□□□□ 0.03
LRRC28Q86X40 MIR3180-3-201ENST00000584616 94 ntBASIC15.22■□□□□ 0.03
LRRC28Q86X40 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 AC092119.3-201ENST00000612618 583 ntBASIC15.22■□□□□ 0.03
LRRC28Q86X40 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRRC28Q86X40 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC28Q86X40 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.21■□□□□ 0.03
LRRC28Q86X40 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 AC005104.2-201ENST00000427818 678 ntBASIC15.21■□□□□ 0.03
LRRC28Q86X40 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 AP002414.4-201ENST00000589764 1148 ntBASIC15.21■□□□□ 0.03
LRRC28Q86X40 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 AC004263.2-201ENST00000617183 678 ntBASIC15.21■□□□□ 0.03
LRRC28Q86X40 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC28Q86X40 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms