Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 HMGA1P7-201ENST00000406908 502 ntBASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZFHX4Q86UP3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 MIR33B-201ENST00000385104 96 ntBASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 AL138918.1-201ENST00000568306 659 ntBASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZFHX4Q86UP3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZFHX4Q86UP3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 CHCHD2P3-201ENST00000603038 451 ntBASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 TEX28P1-201ENST00000613479 1221 ntBASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 TEX28P2-201ENST00000617764 1221 ntBASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 AP000974.1-201ENST00000623909 2387 ntBASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 ELK1P1-201ENST00000485699 580 ntBASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 AC016027.1-202ENST00000607927 1699 ntBASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.76■□□□□ 0.11
ZFHX4Q86UP3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZFHX4Q86UP3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZFHX4Q86UP3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZFHX4Q86UP3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZFHX4Q86UP3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZFHX4Q86UP3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZFHX4Q86UP3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms